Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950985.1_cds_XP_016491200.1_81539
CDS Infomation

[gene=LOC107810887] [db_xref=GeneID:107810887] [protein=translation initiation factor IF-2-like] [protein_id=XP_016491200.1] [location=complement(join(22538..22972,23286..23435,23553..24614,24714..25047,27205..27274,27696..27819,28396..28422))] [gbkey=CDS]
Sequence

ATGGCGTGGAGGGTGGCAGGGAAAAAGGGTACCTTAATTAGTCTTACAAAGGAACTGGCA
GTAAGATCCAGGCATGCTCCAGCATCAGTTTCCAAAACCGACCTTGAAAAGGCGCAGAGA
AAAATTCCACTTTTGTTTGGACAACTACAAGGATGCTTCCCGAATGCAGCTCAATGGAAG
TCAAACTACGGCAGCCTCCTAATGTGCAGATCTTCAATAAGGTATTTTCATGCCAGTCTA
GAAGCACTGGCTTGGAAAAAAGAACCCGAAGCTTTGGGTTTAAAGATACAGAAGAAAGGG
AAGTTCAAGAAAAGGACAAAGGATTCCTCACCACCTGTTGAAGCTCCTTATGTGCCTCCC
AAACTAAAAAGAGTTGCTAACTCCTCCTTATCAGATAGAACTGTAGAGATATTTGAAGGC
ATGACAATTATTGAGCTGGCCAAGCGTTGTGGAGAGTCGATATCTGTCTTGCAGGATATC
CTTATAAATGTAGGGGAGAAAGTTGACTCGGAATATGATCCTCTCGGCATCGACATTGCC
GAGCTCGTTGCGATGGAAGTTGGGGTAAATGTTAGGAGGCTGCATTCAAACGAAGGTGCT
GAAGTCCTGCCACGTCCACCAGTGGTTACAGTGATGGGTCATGTTGACCACGGTAAAACA
TCCCTTTTAGACGCTCTACGTCTGACATCTGTGGCTGCTAAGGAAGCTGGAGGCATAACT
CAGCATTTGGGTGCGTTTGTTGTTGGAATGCCTTCTGGGGCATCAATCACGTTCCTTGAC
ACTCCTGGTCACGCAGCATTTAGTGCTATGCGACAAAGAGGTGCAGCAGTCACTGACATT
GTTGTCTTGGTAGTGGCTGCTGATGACGGCGTTATGCCACAAACGCTGGAAGCAATGTCC
CATGCAAAAGCAGCTGATGTTCCCATTGTTGTTGCCGTCAATAAATGTGACAAACCGGCA
GCAAATCCTGAAAGAGTGAAGATCCAGCTCGCAACAGAAGGGTTGGCTCTCGAGGAGATG
GGTGGAGATATTCAGGTTGTTGAAGTCTCTGCTGTAACTAAAATCGGGTTGGATAAGCTG
GAGGAGGCGTTGCTTCTCCAAGCTGAGTTAATGGATCTGAAGTCACGTGTAGATGGACCG
GCCCAAGCTTATGTGGTCGAAGCAAGGGTCGATAGGGGACGGGGTCCATTGGCTACTGCA
ATAGTGAAAGCTGGAACCCTTGTCTGTGGTCAGCATGTTGTCGTAGGTACCGAGTGGGGA
AAGATCAGGGCTATTAGGGATATGCTAGGAAAATCAACCGATAGGGCTAGACCGGCTATG
CCTGTGGAGATCGAAGGACTCAAGGGGCTTCCGATGGCCGGTGACGACATTACCGTCGTC
CACTCTGAGGAAAGGGCAAGGATGCTTAGTGAAGGGAGGAAAAAGAAATTTGAAAAAGAT
AGACTTAGGAAGATGCAAGAGGAAAAATCAGGAGCTTTAATAGCAGAAGCTAATTCAGAA
GATGAAGAAGGAGAAGAGAAGCCAAAGAGGGTTGAAATGACAATGATAGTAAAAGCAGAT
GTTCAAGGAACTGTCCAAGCCGTCACAGATGCATTGAAGAGTTTGGATAGTCCTCAGGTG
TTCGTGAACATTGTCCATGGAGGAGTGGGGCCTATTTCTGAGTCTGATGTGGATCTAGCA
CAAGCTTGTGGGGCATTTATCGTTGGATTCAACATACGAAATCCACCCAGTTCAATAAAT
CAAGCAGCAACTCAAGCTGGCGTCAAGATAAAACTCCATCGTGTGATCTATCATCTTTTA
GAGGATATTGGCAATTCTATTGTTGAAAAAGCCCCCGGGACATTTGAGACACAGGTCGCA
GGAGAGGCACAGGTACTGAGCATATTTGAGATTAAAGGAAGGAGCAAAGCTAGGGGAGAG
GACGTTAAGATAGCTGGTTGTCGTGTCATGGATGGCCGTCTCACCAAATCATCGACAATG
AGGCTTCTTAGGAGTGGTGAGGTTGTTTTCGAAGGATGTTGTGCATCGCTGAAGCGTGAG
AAGCAGGATGTCGAAGCAGTTGGAAAGGGGAATGAATGTGGACTTGTGATTCAAAATTGG
GTTGACTTCAAGGTTGGAGATGTCATCCAATGCTTGGAACAAGTCAACAGAAAACCAAAA
TTTATTTCATCGCAAAGCGGCGCTGTCAGAATAGAATGTTGA

Peptide Sequence

PEP ID

XP_016491200.1
PEP Infomation

PREDICTED: translation initiation factor IF-2-like [Nicotiana tabacum]
Sequence

MAWRVAGKKGTLISLTKELAVRSRHAPASVSKTDLEKAQRKIPLLFGQLQGCFPNAAQWK
SNYGSLLMCRSSIRYFHASLEALAWKKEPEALGLKIQKKGKFKKRTKDSSPPVEAPYVPP
KLKRVANSSLSDRTVEIFEGMTIIELAKRCGESISVLQDILINVGEKVDSEYDPLGIDIA
ELVAMEVGVNVRRLHSNEGAEVLPRPPVVTVMGHVDHGKTSLLDALRLTSVAAKEAGGIT
QHLGAFVVGMPSGASITFLDTPGHAAFSAMRQRGAAVTDIVVLVVAADDGVMPQTLEAMS
HAKAADVPIVVAVNKCDKPAANPERVKIQLATEGLALEEMGGDIQVVEVSAVTKIGLDKL
EEALLLQAELMDLKSRVDGPAQAYVVEARVDRGRGPLATAIVKAGTLVCGQHVVVGTEWG
KIRAIRDMLGKSTDRARPAMPVEIEGLKGLPMAGDDITVVHSEERARMLSEGRKKKFEKD
RLRKMQEEKSGALIAEANSEDEEGEEKPKRVEMTMIVKADVQGTVQAVTDALKSLDSPQV
FVNIVHGGVGPISESDVDLAQACGAFIVGFNIRNPPSSINQAATQAGVKIKLHRVIYHLL
EDIGNSIVEKAPGTFETQVAGEAQVLSIFEIKGRSKARGEDVKIAGCRVMDGRLTKSSTM
RLLRSGEVVFEGCCASLKREKQDVEAVGKGNECGLVIQNWVDFKVGDVIQCLEQVNRKPK
FISSQSGAVRIEC

Transcript Sequence

Gene sequence data has not been registered.